shapeworks::MeshUtils
Module: Mesh Classes
#include <MeshUtils.h>
Public Functions
| Name | |
|---|---|
| const vtkSmartPointer< vtkMatrix4x4 > | createICPTransform(const Mesh source, const Mesh target, Mesh::AlignmentType align, const unsigned iterations =20, bool meshTransform =false) computes a rigid transformation from source to target using vtkIterativeClosestPointTransform |
| Mesh | create_mesh_from_file(std::string filename, double iso_value =0.5) Mesh from mesh or image file. |
| Mesh | threadSafeReadMesh(std::string filename) Thread safe reading of a mesh, uses a lock. |
| void | threadSafeWriteMesh(std::string filename, Mesh mesh) Thread safe writing of a mesh, uses a lock. |
| PhysicalRegion | boundingBox(const std::vector< std::string > & filenames, bool center =false) calculate bounding box incrementally for meshes |
| PhysicalRegion | boundingBox(const std::vector< std::reference_wrapper< const Mesh > > & meshes, bool center =false) calculate bounding box incrementally for meshes |
| PhysicalRegion | boundingBox(const std::vector< Mesh > & meshes, bool center =false) calculate bounding box incrementally for meshes |
| int | findReferenceMesh(std::vector< Mesh > & meshes, int random_subset_size =-1) determine the reference mesh |
| Mesh | extract_boundary_loop(Mesh mesh) boundary loop extractor for a given mesh |
| std::array< Mesh, 3 > | shared_boundary_extractor(const Mesh & mesh_l, const Mesh & mesh_r, double tol) shared boundary extractor for the left and right mesh |
| void | generateNormals(const std::vector< std::reference_wrapper< Mesh > > & meshes, bool forceRegen =false) generates and adds normals for points and faces for each mesh in given set of meshes |
| Field | computeMeanNormals(const std::vector< std::string > & filenames, bool autoGenerateNormals =true) computes average normals for each point in given set of meshes |
| Field | computeMeanNormals(const std::vector< std::reference_wrapper< const Mesh > > & meshes) computes average normals for each point in given set of meshes |
| int | evaluate_triangle_position(const double x[3], double closestPoint[3], int & subId, double pcoords[3], double & dist2, double weights[], double pt3[3], double pt1[3], double pt2[3]) |
| vtkSmartPointer< vtkPolyData > | clean_mesh(vtkSmartPointer< vtkPolyData > mesh) Clean mesh (merge points and remove degenerate cells) |
| vtkSmartPointer< vtkPolyData > | remove_zero_area_triangles(vtkSmartPointer< vtkPolyData > mesh) Remove zero area triangles from a mesh. |
| vtkSmartPointer< vtkPolyData > | recreate_mesh(vtkSmartPointer< vtkPolyData > mesh) Recreate mesh, dropping deleted cells. |
| vtkSmartPointer< vtkPolyData > | repair_mesh(vtkSmartPointer< vtkPolyData > mesh) Repair mesh: triangulate, extract largest component, clean, fix non-manifold, remove zero-area triangles. |
| void | visualizeVectorFieldForFFCs(std::shared_ptr< Mesh > mesh) This function visualizes vector and scalar fields for FFCs. |
| vtkSmartPointer< vtkActor > | getArrow(Eigen::Vector3d start, Eigen::Vector3d end) Used as an auxiliary function for vector field visualizations. |
Detailed Description
cpp
class shapeworks::MeshUtils;
This class provides helper functions for meshes
Public Functions Documentation
function createICPTransform
cpp
static const vtkSmartPointer< vtkMatrix4x4 > createICPTransform(
const Mesh source,
const Mesh target,
Mesh::AlignmentType align,
const unsigned iterations =20,
bool meshTransform =false
)
computes a rigid transformation from source to target using vtkIterativeClosestPointTransform
function create_mesh_from_file
cpp
static Mesh create_mesh_from_file(
std::string filename,
double iso_value =0.5
)
Mesh from mesh or image file.
function threadSafeReadMesh
cpp
static Mesh threadSafeReadMesh(
std::string filename
)
Thread safe reading of a mesh, uses a lock.
function threadSafeWriteMesh
cpp
static void threadSafeWriteMesh(
std::string filename,
Mesh mesh
)
Thread safe writing of a mesh, uses a lock.
function boundingBox
cpp
static PhysicalRegion boundingBox(
const std::vector< std::string > & filenames,
bool center =false
)
calculate bounding box incrementally for meshes
function boundingBox
cpp
static PhysicalRegion boundingBox(
const std::vector< std::reference_wrapper< const Mesh > > & meshes,
bool center =false
)
calculate bounding box incrementally for meshes
function boundingBox
cpp
static PhysicalRegion boundingBox(
const std::vector< Mesh > & meshes,
bool center =false
)
calculate bounding box incrementally for meshes
function findReferenceMesh
cpp
static int findReferenceMesh(
std::vector< Mesh > & meshes,
int random_subset_size =-1
)
determine the reference mesh
function extract_boundary_loop
cpp
static Mesh extract_boundary_loop(
Mesh mesh
)
boundary loop extractor for a given mesh
function shared_boundary_extractor
cpp
static std::array< Mesh, 3 > shared_boundary_extractor(
const Mesh & mesh_l,
const Mesh & mesh_r,
double tol
)
shared boundary extractor for the left and right mesh
function generateNormals
cpp
static void generateNormals(
const std::vector< std::reference_wrapper< Mesh > > & meshes,
bool forceRegen =false
)
generates and adds normals for points and faces for each mesh in given set of meshes
function computeMeanNormals
cpp
static Field computeMeanNormals(
const std::vector< std::string > & filenames,
bool autoGenerateNormals =true
)
computes average normals for each point in given set of meshes
function computeMeanNormals
cpp
static Field computeMeanNormals(
const std::vector< std::reference_wrapper< const Mesh > > & meshes
)
computes average normals for each point in given set of meshes
function evaluate_triangle_position
cpp
static int evaluate_triangle_position(
const double x[3],
double closestPoint[3],
int & subId,
double pcoords[3],
double & dist2,
double weights[],
double pt3[3],
double pt1[3],
double pt2[3]
)
function clean_mesh
cpp
static vtkSmartPointer< vtkPolyData > clean_mesh(
vtkSmartPointer< vtkPolyData > mesh
)
Clean mesh (merge points and remove degenerate cells)
function remove_zero_area_triangles
cpp
static vtkSmartPointer< vtkPolyData > remove_zero_area_triangles(
vtkSmartPointer< vtkPolyData > mesh
)
Remove zero area triangles from a mesh.
function recreate_mesh
cpp
static vtkSmartPointer< vtkPolyData > recreate_mesh(
vtkSmartPointer< vtkPolyData > mesh
)
Recreate mesh, dropping deleted cells.
function repair_mesh
cpp
static vtkSmartPointer< vtkPolyData > repair_mesh(
vtkSmartPointer< vtkPolyData > mesh
)
Repair mesh: triangulate, extract largest component, clean, fix non-manifold, remove zero-area triangles.
function visualizeVectorFieldForFFCs
cpp
void visualizeVectorFieldForFFCs(
std::shared_ptr< Mesh > mesh
)
This function visualizes vector and scalar fields for FFCs.
function getArrow
cpp
vtkSmartPointer< vtkActor > getArrow(
Eigen::Vector3d start,
Eigen::Vector3d end
)
Used as an auxiliary function for vector field visualizations.
Updated on 2026-03-31 at 16:02:10 +0000