Classes

class ColorScheme
- struct rgb
class ColorSchemes
class CustomSlider
class CustomSurfaceReconstructionFilter
class FEAreaCoverage
- class Surface
class FEAutoMesher
class FECVDDecimationModifier
- class Cluster
- struct EDGE
- class NODE
class FECoreMesh
class FEEdge
class FEElement
class FEElementData
class FEElement_
class FEFace
class FEFillHole
- class EdgeRing
- struct FACE
class FEFixMesh
class FEItem
class FEMesh
class FEMeshSmoothingModifier
class FENode
class FENodeElementList
class FENodeFaceList
class FENodeNodeList
class FETri3
class FEVTKExport
class FEVTKimport
class GLCOLOR
struct Intersection
class LegacyMeshGenerator
class MeshSettings
Settings for creating a mesh.
class ObjectReader
class ObjectWriter
class ParticleEvent:: Parent
class ParticleImageDomain
class ParticleImageDomainWithCurvature
class ParticleImageDomainWithGradN
class ParticleImageDomainWithGradients
class ParticleImplicitSurfaceDomain
class ParticleMeanCurvatureAttribute
class ParticleProcrustesRegistration
class ParticleShapeLinearRegressionMatrixAttribute
class ParticleShapeMatrixAttribute
Each column describes a shape. A shape may be composed of m_DomainsPerShape domains (default 1). ALL DOMAINS ARE NOT ASSUMED TO HAVE THE SAME NUMBER OF PARTICLES!
class ParticleShapeMixedEffectsMatrixAttribute
class Preferences
Application preferences.
class Procrustes3D
struct Quad
struct Ray
class Reconstruction
struct SimilarityTransform3D
class StudioImageActorPointPlacer
class StudioLogger
Handle logger callbacks via Qt for thread correctness.
class SurfaceReconstructor
struct Triangle
namespace Ui
class Utils
struct VTKEXPORT
namespace fmt
- struct formatter< QString >
namespace itk
- class AdvancedTransform
  Transform maps points, vectors and covariant vectors from an input space to an output space.
- class BSplineInterpolateImageFunctionWithDoubleCoefficents
- class CompactlySupportedRBFSparseKernelTransform
- namespace Functor
  - class MultiplyByConstant
- class KernelTransform2
- class MultiplyByConstantImageFilter
  Multiply input pixels by a constant.
- class SparseKernelTransform
- class TPGACLevelSetImageFilter
- class ThinPlateSplineKernelTransform2
class mat3d
class matrix
class meshFIM
namespace monailabel
- class MonaiLabelJob
- class MonaiLabelTool
- class MonaiLabelUtils
- class UrlValidator
class object_reader
class object_writer
class quatd
namespace shapeworks
User usage reporting (telemetry)
- class AnalysisTool
- class AnalysisUtils
- class Analyze
  High level analyze API.
- class AnalyzeCommandGroup
- class ColorMap
- class ColorMaps
- class Command
- class CompareSettings
- class CompareWidget
- class Constraint
- class Constraints
- class ContourDomain
- class CorrespondenceEvaluation
- class CorrespondenceFunction
  Correspondence term.
- struct CorrespondenceQualityReport
  Full evaluation report.
- struct CorrespondenceQualityRow
  Per-subject-per-domain correspondence quality result row.
- struct CorrespondenceQualityStats
  Aggregate summary statistics.
- class DataTool
- class DeepSSMCommandGroup
- class DeepSSMJob
  Qt Wrapper for DeepSSM.
- class DeepSSMParameters
- class DeepSSMTool
- class DisentangledCorrespondenceFunction
- class DualVectorFunction
- class EarlyStopping
- struct EarlyStoppingConfig
  Configuration for early stopping criteria.
- class EigenUtils
- class ExcelProjectReader
  Excel file format reader for Project.
- class ExcelProjectWriter
  Excel file format writer for Project.
- class Executable
- class ExportImageDialog
- class ExportUtils
  Export utilities for Studio.
- class FreeFormConstraint
- class GenericContainer
  This class seems to be only a wrapper around std::vector implementing ITK DataObject (for smart pointer?)
- class GenericContainerArray
  This class appears to be an array of GenericContainers (e.g. std::vector) that implements the Observer interface. The array size tracks the number of domains in the system. E.g. one per domain.
- class GradientDescentOptimizer
  Optimizes particle system positions using gradient descent.
- class Groom
  High level groom API.
- class GroomCommandGroup
- class GroomParameters
  - struct SharedBoundary
- class GroomTool
- class GroupPvalueJob
- class Image
- class ImageCommand
- class ImageDomain
- class ImageDomainWithCurvature
- class ImageDomainWithGradN
- class ImageDomainWithGradients
- class ImageLabel
  An extention of QLabel especially for scaled images.
- class ImageRegistration
- class ImageUtils
  Helper functions for image.
- class ImplicitSurfaceDomain
- class IndexRegion
  Indices into a 3d region of memory (can be negative, e.g., for the purpose of padding an image)
- class Job
- class JsonProjectReader
  JSON file format reader for Project.
- class JsonProjectWriter
  JSON file format writer for Project.
- class KeyboardShortcuts
- class LandmarkDefinition
  Landmark class containing properties of each landmark.
- class LandmarkItemDelegate
- class LandmarkTableModel
- class LandmarkWidget
  LandmarkWidget.
- class LegacyCorrespondenceFunction
- class LegacyShapeMatrix
- class Lightbox
  Display multiple Viewers in a tiled display.
- class LinearRegressionShapeMatrix
- class LogWindow
  Log Window.
- class Logging
  ShapeWorks Logging Library.
- class MatrixContainer
- class MeanCurvatureContainer
- class Mesh
- class MeshCache
  Thread safe cache for meshes index by shape.
- class MeshCommand
- class MeshDomain
- class MeshGenerator
- struct MeshGeoEntry
- class MeshGroup
  Representation of a group of meshes.
- class MeshManager
  Class to manage meshes.
- class MeshReader
  reads mesh (used only by one of the Mesh constructors)
- class MeshReconstructors
- class MeshSlice
  MeshSlice.
- class MeshUtils
- class MeshWarper
- class MeshWorkItem
  Provides concurrent access to a list of shapes to work needing reconstruction.
- class MeshWorkQueue
- class MeshWorker
- class MixedEffectsShapeMatrix
- class MorphologicalDeviationScore
- struct MultiVariateNormalRandom
- class NetworkAnalysisJob
- class Observer
  This class is an observer interface for classes to monitor for changes to the optimizer (observer pattern)
  - struct DefinedCallbacksStruct
- class OptimizationVisualizer
- class Optimize
- class OptimizeCommandGroup
- class OptimizeParameterFile
- class OptimizeParameters
- class OptimizeTool
- class PaintWidget
- class Parameters
  Parameter settings.
- class ParticleArea
- class ParticleAreaJob
- class ParticleAreaPanel
- class ParticleColors
  Supplies particle colors.
- class ParticleDomain
- class ParticleEvent
- class ParticleGaussianModeWriter
- class ParticleGoodBadAssessment
  Performs good/bad points assessment and reports the bad positions of the particle system.
- class ParticleNeighborhood
- class ParticleNormalEvaluation
- class ParticleNormalEvaluationJob
- struct ParticlePointIndexPair
- class ParticleRegionDomain
- class ParticleShapeStatistics
- class ParticleSystem
  A facade class managing interactions with a particle system.
- class ParticleSystemCommand
- class ParticleSystemEvaluation
- class Particles
  Representation of correspondence points for a shape including multiple domains.
- class PhysicalRegion
  physical bounds of a 3d region of space
- class PickResult
- class PlaneConstraint
- class PlaneWidget
  PlaneWidget.
- class PlatformUtils
  Platform utility functions.
- class PreferencesWindow
  Qt UI dialog to control preferences.
- class ProcrustesRegistration
  - struct FixedDomainCache
- struct ProfileEntry
- class Profiler
- class Project
  Representation of a project.
- class ProjectCommandGroup
- class ProjectReader
  Base class for Project readers.
- class ProjectUtils
- class PythonWorker
- class QMeshWarper
  Wraps MeshWarper as a QObject.
- class QOptimize
  Wraps Optimize as a QObject.
- class ReconstructSurface
- struct Reconstruction
- class Sampler
  - struct CuttingPlaneType
  - struct SphereType
- class SamplingFunction
  - struct CrossDomainNeighborhood
- class ScopedTimer
- class SegmentationToolPanel
- class Session
  Representation of a session.
- class Shape
  Representation of a single shape/patient/subject.
  - class Point
    TODO: replace this wherever it is used.
- class ShapeEvaluation
- class ShapeEvaluationJob
  The ShapeEvaluationJob class is a worker class that computes shape evaluation metrics of compactness, specificity, and generalization. It runs asynchronously using the Job and Worker interfaces.
- class ShapeGradientMatrix
  Each column describes a shape. A shape may be composed of m_DomainsPerShape domains (default 1). ALL DOMAINS ARE NOT ASSUMED TO HAVE THE SAME NUMBER OF PARTICLES!
- class ShapeMatrix
  Each column describes a shape. A shape may be composed of m_DomainsPerShape domains (default 1). ALL DOMAINS ARE NOT ASSUMED TO HAVE THE SAME NUMBER OF PARTICLES!
- class ShapeScalarJob
- class ShapeScalarPanel
- class ShapeWorksStudioApp
  Main ShapeWorksStudio window.
- class ShapeWorksUtils
- class ShapeWorksVtkOutputWindow
  Implementation of vtkOutputWindow to capture and display VTK error messages.
- class ShapeworksCommand
- class ShapeworksWorker
- struct SharedCommandData
- class SliceView
  SliceView.
- class SplashScreen
- class StatsGroupDWDJob
- class StatsGroupLDAJob
- class StatusBarWidget
  StatusBarWidget.
- class StringUtils
  String utility functions.
- class StudioHandleWidget
- class StudioInteractorStyle
- class StudioMesh
  Representation of a single mesh.
- class StudioSliceInteractorStyle
- class StudioUtils
  Utilities for Studio.
- class Style
- class Subject
  Representation of a single subject.
- class Surface
- class Telemetry
- class TimerStackEntry
- struct TraceEvent
- class UpdateChecker
  Update Checker.
- class Variant
  Variant class to represent multiple types.
- class VectorFunction
- class VectorImage
  Gradient (vector) image.
- class Viewer
  3D Viewer
- class Visualizer
  Controls display of objects in viewers.
- class WheelEventForwarder
- class Worker
- namespace mesh
- namespace particles
- namespace project
  - namespace prefixes
  - namespace types
namespace std
namespace utils
class vec2d
class vec3d
class vec6d
class vtkPolyDataToImageData

Updated on 2026-11-03 at 20:56:16 +0000