shapeworks::ImplicitSurfaceDomain
Inherits from shapeworks::ImageDomainWithCurvature< T >, shapeworks::ImageDomainWithGradN< T >, shapeworks::ImageDomainWithGradients< T >, shapeworks::ImageDomain< T >, shapeworks::ParticleRegionDomain, shapeworks::ParticleDomain
Public Types
| Name | |
|---|---|
| typedef ImageDomainWithCurvature< T > | Superclass |
| typedef std::shared_ptr< ImplicitSurfaceDomain > | Pointer |
| typedef Superclass::ImageType | ImageType |
| typedef Superclass::PointType | PointType |
Public Functions
| Name | |
|---|---|
| virtual void | SetTolerance(const T _Tolerance) |
| virtual T | GetTolerance() |
| virtual shapeworks::DomainType | GetDomainType() const override |
| virtual bool | ApplyConstraints(PointType & p, int idx, bool dbg =false) const override |
| PointType | UpdateParticlePosition(const PointType & point, int idx, vnl_vector_fixed< double, DIMENSION > & update) const override |
| virtual PointType | GetZeroCrossingPoint() const override |
| ImplicitSurfaceDomain() | |
| void | PrintSelf(std::ostream & os, itk::Indent indent) const |
| virtual | ~ImplicitSurfaceDomain() |
Additional inherited members
Public Types inherited from shapeworks::ImageDomainWithCurvature< T >
| Name | |
|---|---|
| typedef Superclass::VnlMatrixType | VnlMatrixType |
Public Functions inherited from shapeworks::ImageDomainWithCurvature< T >
| Name | |
|---|---|
| void | SetImage(ImageType * I, double narrow_band) |
| virtual double | GetCurvature(const PointType & p, int idx) const override |
| virtual double | GetSurfaceMeanCurvature() const override |
| virtual double | GetSurfaceStdDevCurvature() const override |
Protected Functions inherited from shapeworks::ImageDomainWithCurvature< T >
| Name | |
|---|---|
| ImageDomainWithCurvature() | |
| virtual | ~ImageDomainWithCurvature() |
Public Types inherited from shapeworks::ImageDomainWithGradN< T >
| Name | |
|---|---|
| typedef Superclass::GradNType | GradNType |
| typedef Superclass::GradNType | VnlMatrixType |
Public Functions inherited from shapeworks::ImageDomainWithGradN< T >
| Name | |
|---|---|
| void | SetImage(ImageType * I, double narrow_band) |
| virtual GradNType | SampleGradNAtPoint(const PointType & p, int idx) const override |
| virtual void | DeletePartialDerivativeImages() override |
| virtual void | DeleteImages() override |
Protected Functions inherited from shapeworks::ImageDomainWithGradN< T >
| Name | |
|---|---|
| ImageDomainWithGradN() | |
| virtual | ~ImageDomainWithGradN() |
Public Types inherited from shapeworks::ImageDomainWithGradients< T >
| Name | |
|---|---|
| typedef itk::FixedArray< T, DIMENSION > | VectorType |
| typedef vnl_vector_fixed< T, DIMENSION > | VnlVectorType |
Public Functions inherited from shapeworks::ImageDomainWithGradients< T >
| Name | |
|---|---|
| void | SetImage(ImageType * I, double narrow_band) |
| virtual vnl_vector_fixed< float, DIMENSION > | SampleGradientAtPoint(const PointType & p, int idx) const |
| virtual vnl_vector_fixed< float, DIMENSION > | SampleNormalAtPoint(const PointType & p, int idx) const |
| vnl_vector_fixed< double, DIMENSION > | ProjectVectorToSurfaceTangent(vnl_vector_fixed< double, DIMENSION > & gradE, const PointType & pos, int idx) const override |
| virtual void | DeleteImages() override |
Protected Functions inherited from shapeworks::ImageDomainWithGradients< T >
| Name | |
|---|---|
| ImageDomainWithGradients() | |
| virtual | ~ImageDomainWithGradients() |
| openvdb::VectorGrid::Ptr | GetVDBGradient() |
Public Functions inherited from shapeworks::ImageDomain< T >
| Name | |
|---|---|
| void | SetImage(ImageType * I, double narrow_band) |
| virtual double | GetSurfaceArea() const override |
| PointType | GetOrigin() const |
| ImageType::SizeType | GetSize() const |
| ImageType::SpacingType | GetSpacing() const |
| ImageType::RegionType::IndexType | GetIndex() const |
| virtual PointType | GetValidLocationNear(PointType p) const override |
| T | Sample(const PointType & p) const |
| virtual double | GetMaxDiameter() const override |
| virtual void | DeleteImages() override |
| virtual void | UpdateZeroCrossingPoint() override |
Protected Functions inherited from shapeworks::ImageDomain< T >
| Name | |
|---|---|
| openvdb::FloatGrid::Ptr | GetVDBImage() const |
| ImageDomain() | |
| virtual | ~ImageDomain() |
| openvdb::math::Transform::Ptr | transform() const |
| openvdb::Vec3R | ToVDBCoord(const PointType & p) const |
Public Functions inherited from shapeworks::ParticleRegionDomain
| Name | |
|---|---|
| virtual const PointType & | GetUpperBound() const |
| virtual const PointType & | GetLowerBound() const |
| void | SetUpperBound(const PointType _UpperBound) |
| void | SetLowerBound(const PointType _LowerBound) |
| void | SetRegion(const PointType & lowerBound, const PointType & upperBound) |
Protected Functions inherited from shapeworks::ParticleRegionDomain
| Name | |
|---|---|
| ParticleRegionDomain() | |
| virtual | ~ParticleRegionDomain() |
| bool | IsInsideBuffer(const PointType & p) const |
Public Types inherited from shapeworks::ParticleDomain
| Name | |
|---|---|
| using vnl_matrix_fixed< float, 3, 3 > | GradNType |
| using vnl_vector_fixed< double, 3 > | VectorDoubleType |
| using vnl_vector_fixed< float, 3 > | VectorFloatType |
Public Functions inherited from shapeworks::ParticleDomain
| Name | |
|---|---|
| virtual void | InvalidateParticlePosition(int idx) const |
| virtual VectorDoubleType | ProjectVectorToSurfaceTangent(VectorDoubleType & gradE, const PointType & pos, int idx) const =0 |
| virtual VectorFloatType | SampleGradientAtPoint(const PointType & point, int idx) const =0 |
| virtual VectorFloatType | SampleNormalAtPoint(const PointType & point, int idx) const =0 |
| virtual GradNType | SampleGradNAtPoint(const PointType & p, int idx) const =0 |
| virtual double | Distance(const PointType & a, int idx_a, const PointType & b, int idx_b, VectorDoubleType * out_grad =nullptr) const |
| virtual double | SquaredDistance(const PointType & a, int idx_a, const PointType & b, int idx_b) const |
| virtual bool | IsWithinDistance(const PointType & a, int idx_a, const PointType & b, int idx_b, double test_dist, double & distance) const |
| virtual double | GetCurvature(const PointType & p, int idx) const =0 |
| virtual double | GetSurfaceMeanCurvature() const =0 |
| virtual double | GetSurfaceStdDevCurvature() const =0 |
| virtual const PointType & | GetLowerBound() const =0 |
| virtual const PointType & | GetUpperBound() const =0 |
| virtual double | GetSurfaceArea() const =0 |
| virtual PointType | GetValidLocationNear(PointType p) const =0 |
| virtual double | GetMaxDiameter() const =0 |
| virtual void | DeleteImages() =0 |
| virtual void | DeletePartialDerivativeImages() =0 |
| virtual void | UpdateZeroCrossingPoint() =0 |
| bool | IsDomainFixed() const |
| std::shared_ptr< shapeworks::Constraints > | GetConstraints() const |
| virtual PointType | GetPositionAfterSplit(const PointType & pt, const VectorDoubleType & local_direction, const VectorDoubleType & global_direction, double epsilon) const |
| void | SetDomainID(int id) |
| void | SetDomainName(std::string name) |
Protected Functions inherited from shapeworks::ParticleDomain
| Name | |
|---|---|
| ParticleDomain() | |
| virtual | ~ParticleDomain() |
Protected Attributes inherited from shapeworks::ParticleDomain
| Name | |
|---|---|
| bool | m_FixedDomain |
| int | m_DomainID |
| std::string | m_DomainName |
| std::shared_ptr< shapeworks::Constraints > | constraints |
Detailed Description
template <class T >
class shapeworks::ImplicitSurfaceDomain;
Public Types Documentation
typedef Superclass
typedef ImageDomainWithCurvature<T> shapeworks::ImplicitSurfaceDomain< T >::Superclass;
Standard class typedefs
typedef Pointer
typedef std::shared_ptr<ImplicitSurfaceDomain> shapeworks::ImplicitSurfaceDomain< T >::Pointer;
typedef ImageType
typedef Superclass::ImageType shapeworks::ImplicitSurfaceDomain< T >::ImageType;
typedef PointType
typedef Superclass::PointType shapeworks::ImplicitSurfaceDomain< T >::PointType;
Public Functions Documentation
function SetTolerance
inline virtual void SetTolerance(
const T _Tolerance
)
Set/Get the precision of the projection operation. The resulting projection will be within the specified tolerance.
function GetTolerance
inline virtual T GetTolerance()
function GetDomainType
inline virtual shapeworks::DomainType GetDomainType() const override
Reimplements: shapeworks::ParticleDomain::GetDomainType
function ApplyConstraints
inline virtual bool ApplyConstraints(
PointType & p,
int idx,
bool dbg =false
) const override
Reimplements: shapeworks::ParticleDomain::ApplyConstraints
Apply any constraints to the given point location. This method constrains points to lie within the given domain and on a given implicit surface. If the point is not already on the surface, it is projected back to the surface using a Newton-Raphson iteration. IMPORTANT: This method returns the true/false value of its superclass, and does not indicate changes only due to projection. This is done for speed: we typically will only want to know if a point tried to move outside of the bounding box domain, since movement off the surface will be very common. Consider subclassing this method to add a check for significant differences in the input and output points.
function UpdateParticlePosition
inline PointType UpdateParticlePosition(
const PointType & point,
int idx,
vnl_vector_fixed< double, DIMENSION > & update
) const override
function GetZeroCrossingPoint
inline virtual PointType GetZeroCrossingPoint() const override
Reimplements: shapeworks::ParticleDomain::GetZeroCrossingPoint
Get any valid point on the domain. This is used to place the first particle.
function ImplicitSurfaceDomain
inline ImplicitSurfaceDomain()
function PrintSelf
inline void PrintSelf(
std::ostream & os,
itk::Indent indent
) const
function ~ImplicitSurfaceDomain
inline virtual ~ImplicitSurfaceDomain()
Updated on 2024-03-17 at 12:58:44 -0600