Files

• dir Applications
  • dir Applications/shapeworks
    • file Applications/shapeworks/Command.h
    • file Applications/shapeworks/Commands.h
    • file Applications/shapeworks/Executable.h
    • file Applications/shapeworks/SharedCommandData.h
• dir Documentation
  • dir Documentation/Doxygen
• dir Documentation
  • dir Documentation/Doxygen
• dir Libs
  • dir Libs/Alignment
    • dir Libs/Alignment/Transforms
      • file Libs/Alignment/Transforms/itkAdvancedTransform.h
      • file Libs/Alignment/Transforms/itkCompactlySupportedRBFSparseKernelTransform.h
      • file Libs/Alignment/Transforms/itkKernelTransform2.h
      • file Libs/Alignment/Transforms/itkSparseKernelTransform.h
      • file Libs/Alignment/Transforms/itkThinPlateSplineKernelTransform2.h
    • file Libs/Alignment/Procrustes3D.h
  • dir Libs/Analyze
    • file Libs/Analyze/Reconstruction.h
    • file Libs/Analyze/Vis.h
  • dir Libs/Common
    • file Libs/Common/Exception.h
    • file Libs/Common/Region.h
    • file Libs/Common/Shapeworks.h
    • file Libs/Common/ShapeworksUtils.h
  • dir Libs/Groom
    • file Libs/Groom/Groom.h
    • file Libs/Groom/GroomParameters.h
  • dir Libs/Image
    • file Libs/Image/Image.h
    • file Libs/Image/ImageUtils.h
    • file Libs/Image/VectorImage.h
    • file Libs/Image/itkTPGACLevelSetImageFilter.h
  • dir Libs/Mesh
    • dir Libs/Mesh/PreviewMeshQC
      • file Libs/Mesh/PreviewMeshQC/FEAreaCoverage.h
      • file Libs/Mesh/PreviewMeshQC/FEAutoMesher.h
      • file Libs/Mesh/PreviewMeshQC/FECVDDecimationModifier.h
      • file Libs/Mesh/PreviewMeshQC/FECoreMesh.h
      • file Libs/Mesh/PreviewMeshQC/FEElement.h
      • file Libs/Mesh/PreviewMeshQC/FEFillHole.h
      • file Libs/Mesh/PreviewMeshQC/FEFixMesh.h
      • file Libs/Mesh/PreviewMeshQC/FEMesh.h
      • file Libs/Mesh/PreviewMeshQC/FEMeshSmoothingModifier.h
      • file Libs/Mesh/PreviewMeshQC/FENodeElementList.h
      • file Libs/Mesh/PreviewMeshQC/FENodeFaceList.h
      • file Libs/Mesh/PreviewMeshQC/FENodeNodeList.h
      • file Libs/Mesh/PreviewMeshQC/FEVTKExport.h
      • file Libs/Mesh/PreviewMeshQC/FEVTKImport.h
      • file Libs/Mesh/PreviewMeshQC/Intersect.h
      • file Libs/Mesh/PreviewMeshQC/math3d.h
      • file Libs/Mesh/PreviewMeshQC/stdafx.h
    • file Libs/Mesh/Mesh.h
    • file Libs/Mesh/MeshUtils.h
    • file Libs/Mesh/MeshWarper.h
      Mesh warping capability.
    • file Libs/Mesh/itkMultiplyByConstantImageFilter.h
    • file Libs/Mesh/meshFIM.h
  • dir Libs/Optimize
    • file Libs/Optimize/Global.h
    • dir Libs/Optimize/ParticleSystem
      • file Libs/Optimize/ParticleSystem/Constraint.h
      • file Libs/Optimize/ParticleSystem/ConstraintType.h
      • file Libs/Optimize/ParticleSystem/Constraints.h
      • file Libs/Optimize/ParticleSystem/ContourDomain.h
      • file Libs/Optimize/ParticleSystem/CorrespondenceMode.h
      • file Libs/Optimize/ParticleSystem/DomainType.h
      • file Libs/Optimize/ParticleSystem/FreeFormConstraint.h
      • file Libs/Optimize/ParticleSystem/MemoryUsage.h
      • file Libs/Optimize/ParticleSystem/MeshDomain.h
      • file Libs/Optimize/ParticleSystem/MeshGeoEntry.h
      • file Libs/Optimize/ParticleSystem/MeshWrapper.h
      • file Libs/Optimize/ParticleSystem/OptimizationVisualizer.h
      • file Libs/Optimize/ParticleSystem/ParticleDomain.h
      • file Libs/Optimize/ParticleSystem/ParticleImageDomain.h
      • file Libs/Optimize/ParticleSystem/ParticleImageDomainWithCurvature.h
      • file Libs/Optimize/ParticleSystem/ParticleImageDomainWithGradN.h
      • file Libs/Optimize/ParticleSystem/ParticleImageDomainWithGradients.h
      • file Libs/Optimize/ParticleSystem/ParticleImplicitSurfaceDomain.h
      • file Libs/Optimize/ParticleSystem/ParticleProcrustesRegistration.h
      • file Libs/Optimize/ParticleSystem/ParticleRegionDomain.h
      • file Libs/Optimize/ParticleSystem/PlaneConstraint.h
      • file Libs/Optimize/ParticleSystem/Sampler.h
      • file Libs/Optimize/ParticleSystem/SphereConstraint.h
      • file Libs/Optimize/ParticleSystem/TriMeshWrapper.h
      • file Libs/Optimize/ParticleSystem/VtkMeshWrapper.h
      • file Libs/Optimize/ParticleSystem/itkParticleAttribute.h
      • file Libs/Optimize/ParticleSystem/itkParticleConstrainedModifiedCotangentEntropyGradientFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleContainer.h
      • file Libs/Optimize/ParticleSystem/itkParticleContainerArrayAttribute.h
      • file Libs/Optimize/ParticleSystem/itkParticleCurvatureEntropyGradientFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleCurvatureEntropyPlanarConstraint.h
      • file Libs/Optimize/ParticleSystem/itkParticleDualVectorFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleEnsembleEntropyFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleEntropyGradientFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleEvents.h
      • file Libs/Optimize/ParticleSystem/itkParticleGaussianModeWriter.h
      • file Libs/Optimize/ParticleSystem/itkParticleGeneralShapeGradientMatrix.h
      • file Libs/Optimize/ParticleSystem/itkParticleGeneralShapeMatrix.h
      • file Libs/Optimize/ParticleSystem/itkParticleGoodBadAssessment.h
      • file Libs/Optimize/ParticleSystem/itkParticleGradientDescentPositionOptimizer.h
      • file Libs/Optimize/ParticleSystem/itkParticleMeanCurvatureAttribute.h
      • file Libs/Optimize/ParticleSystem/itkParticleMeshBasedGeneralEntropyGradientFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleModifiedCotangentEntropyGradientFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticleNeighborhood.h
      • file Libs/Optimize/ParticleSystem/itkParticleOmegaGradientFunction.h
      • file Libs/Optimize/ParticleSystem/itkParticlePointIndexPair.h
      • file Libs/Optimize/ParticleSystem/itkParticleRegionNeighborhood.h
      • file Libs/Optimize/ParticleSystem/itkParticleShapeLinearRegressionMatrixAttribute.h
      • file Libs/Optimize/ParticleSystem/itkParticleShapeMatrixAttribute.h
      • file Libs/Optimize/ParticleSystem/itkParticleShapeMixedEffectsMatrixAttribute.h
      • file Libs/Optimize/ParticleSystem/itkParticleSurfaceNeighborhood.h
      • file Libs/Optimize/ParticleSystem/itkParticleSystem.h
      • file Libs/Optimize/ParticleSystem/itkParticleVectorFunction.h
      • file Libs/Optimize/ParticleSystem/itkPowerOfTwoPointTree.h
      • file Libs/Optimize/ParticleSystem/object_reader.h
      • file Libs/Optimize/ParticleSystem/object_writer.h
    • file Libs/Optimize/Optimize.h
    • file Libs/Optimize/OptimizeParameterFile.h
    • file Libs/Optimize/OptimizeParameters.h
  • dir Libs/Particles
    • file Libs/Particles/EvaluationUtil.h
    • file Libs/Particles/ParticleNormalEvaluation.h
    • file Libs/Particles/ParticleShapeStatistics.h
    • file Libs/Particles/ParticleSystem.h
    • file Libs/Particles/ReconstructSurface.h
    • file Libs/Particles/ShapeEvaluation.h
    • file Libs/Particles/itkParticlePositionReader.h
    • file Libs/Particles/itkParticlePositionWriter.h
  • dir Libs/Project
    • file Libs/Project/Landmarks.h
    • file Libs/Project/Parameters.h
    • file Libs/Project/Project.h
    • file Libs/Project/ProjectUtils.h
    • file Libs/Project/Subject.h
    • file Libs/Project/Variant.h
  • dir Libs/Python
    • file Libs/Python/pybind_utils.h
  • dir Libs/Utils
    • file Libs/Utils/EigenUtils.h
    • file Libs/Utils/StringUtils.h
    • file Libs/Utils/Utils.h
• file Module.dox
• file Module.dox
• file Overview.dox
• dir Studio
  • dir Studio/src
    • dir Studio/src/Analysis
      • file Studio/src/Analysis/AnalysisTool.h
      • file Studio/src/Analysis/ShapeEvaluationJob.h
    • dir Studio/src/Data
      • file Studio/src/Data/CustomSurfaceReconstructionFilter.h
      • file Studio/src/Data/DataTool.h
      • file Studio/src/Data/ExportUtils.h
      • file Studio/src/Data/ItkToVtk.h
      • file Studio/src/Data/LandmarkItemDelegate.h
      • file Studio/src/Data/LandmarkTableModel.h
      • file Studio/src/Data/LegacyMeshGenerator.h
        Mesh generation.
      • file Studio/src/Data/MeshCache.h
        Thread safe cache for meshes index by shape.
      • file Studio/src/Data/MeshGenerator.h
        Mesh generation.
      • file Studio/src/Data/MeshGroup.h
      • file Studio/src/Data/MeshManager.h
        Class to manage meshes.
      • file Studio/src/Data/MeshSettings.h
      • file Studio/src/Data/MeshWorkQueue.h
        Provides concurrent access to a list of shapes to work needing reconstruction.
      • file Studio/src/Data/MeshWorker.h
        Worker class for parallel mesh reconstruction.
      • file Studio/src/Data/PlaneTableModel.h
      • file Studio/src/Data/Preferences.h
      • file Studio/src/Data/PreferencesWindow.h
      • file Studio/src/Data/QMeshWarper.h
      • file Studio/src/Data/Session.h
      • file Studio/src/Data/Shape.h
      • file Studio/src/Data/ShapeWorksWorker.h
      • file Studio/src/Data/StudioEnums.h
      • file Studio/src/Data/StudioLog.h
      • file Studio/src/Data/StudioMesh.h
      • file Studio/src/Data/StudioParticles.h
      • file Studio/src/Data/SurfaceReconstructor.h
        Surface Reconstruction Layer.
      • file Studio/src/Data/Worker.h
      • file Studio/src/Data/vtkPolyDataToImageData.h
    • dir Studio/src/DeepSSM
      • file Studio/src/DeepSSM/DeepSSMJob.h
      • file Studio/src/DeepSSM/DeepSSMParameters.h
      • file Studio/src/DeepSSM/DeepSSMTool.h
    • dir Studio/src/Groom
      • file Studio/src/Groom/GroomAlignment.h
      • file Studio/src/Groom/GroomImage.h
      • file Studio/src/Groom/GroomMesh.h
      • file Studio/src/Groom/GroomTool.h
      • file Studio/src/Groom/QGroom.h
    • dir Studio/src/Interface
      • file Studio/src/Interface/CompareWidget.h
      • file Studio/src/Interface/ExportImageDialog.h
      • file Studio/src/Interface/KeyboardShortcuts.h
      • file Studio/src/Interface/LogWindow.h
      • file Studio/src/Interface/ShapeWorksStudioApp.h
      • file Studio/src/Interface/SplashScreen.h
      • file Studio/src/Interface/StatusBarWidget.h
      • file Studio/src/Interface/Style.h
      • file Studio/src/Interface/WheelEventForwarder.h
    • dir Studio/src/Job
      • file Studio/src/Job/GroupPvalueJob.h
      • file Studio/src/Job/Job.h
      • file Studio/src/Job/ParticleNormalEvaluationJob.h
      • file Studio/src/Job/StatsGroupLDAJob.h
    • dir Studio/src/Optimize
      • file Studio/src/Optimize/OptimizeTool.h
      • file Studio/src/Optimize/QOptimize.h
    • dir Studio/src/Python
      • file Studio/src/Python/PythonWorker.h
    • dir Studio/src/Resources
      • file Studio/src/Resources/resource.h
    • dir Studio/src/Utils
      • file Studio/src/Utils/AnalysisUtils.h
      • file Studio/src/Utils/ImageLabel.h
      • file Studio/src/Utils/StackWalker.h
      • file Studio/src/Utils/StudioUtils.h
      • file Studio/src/Utils/WindowsCrashHandler.h
    • dir Studio/src/Visualization
      • file Studio/src/Visualization/ColorMap.h
      • file Studio/src/Visualization/ColorSchemes.h
      • file Studio/src/Visualization/LandmarkWidget.h
      • file Studio/src/Visualization/Lightbox.h
      • file Studio/src/Visualization/MeshSlice.h
      • file Studio/src/Visualization/PaintWidget.h
      • file Studio/src/Visualization/PlaneWidget.h
      • file Studio/src/Visualization/SliceView.h
      • file Studio/src/Visualization/StudioHandleWidget.h
      • file Studio/src/Visualization/StudioInteractorStyle.h
      • file Studio/src/Visualization/StudioSliceInteractorStyle.h
      • file Studio/src/Visualization/StudioVtkOutputWindow.h
      • file Studio/src/Visualization/Viewer.h
      • file Studio/src/Visualization/Visualizer.h

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Updated on 2022-07-23 at 16:40:07 -0600