Seg3D::PointSetFilterAlgo Member List

This is the complete list of members for Seg3D::PointSetFilterAlgo, including all inherited members.

abort_and_wait() override	Seg3D::LayerFilter	virtual
catch(...) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo	inline
check_abort()	Seg3D::PointSetFilterAlgo	inlinevirtual
check_stop()	Seg3D::LayerFilter
cii (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
connect_abort(const LayerHandle &layer)	Seg3D::LayerFilter
connect_stop(const LayerHandle &layer)	Seg3D::LayerFilter
convert_and_insert_itk_image_into_layer(const LayerHandle &layer, typename itk::Image< T, 3 > *itk_image, Core::DataType data_type)	Seg3D::ITKFilter	inlineprotected
convert_and_insert_itk_image_pointer_into_layer(const LayerHandle &layer, typename itk::Image< T, 3 >::Pointer itk_image, Core::DataType data_type)	Seg3D::ITKFilter	inlineprotected
CORE_LOG_MESSAGE(std::string("Number of fixed Points = ")+boost::lexical_cast< std::string >(fixed_points_num)) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
CORE_LOG_MESSAGE(std::string("Number of moving Points = ")+boost::lexical_cast< std::string >(moving_points_num)) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
CORE_LOG_MESSAGE(std::string("Solution = ")+solution) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
create_and_lock_data_layer(const Core::GridTransform &grid_trans, LayerHandle src_layer, LayerHandle &dst_layer)	Seg3D::LayerFilter
create_and_lock_data_layer_from_layer(LayerHandle src_layer, LayerHandle &dst_layer)	Seg3D::LayerFilter
create_and_lock_mask_layer(const Core::GridTransform &grid_trans, LayerHandle src_layer, LayerHandle &dst_layer)	Seg3D::LayerFilter
create_and_lock_mask_layer_from_layer(LayerHandle src_layer, LayerHandle &dst_layer)	Seg3D::LayerFilter
create_and_lock_mask_layer_from_layer(LayerHandle src_layer, LayerHandle &dst_layer, std::string dst_name)	Seg3D::LayerFilter
create_cropped_large_volume_layer(const Core::GridTransform &crop_trans, LayerHandle src_layer, LayerHandle &dst_layer)	Seg3D::LayerFilter
create_undo_redo_and_provenance_record(Core::ActionContextHandle context, Core::ActionHandle action, bool split_prov=false)	Seg3D::LayerFilter
DIMENSION_C (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
dispatch_delete_layer(LayerHandle layer)	Seg3D::LayerFilter
dispatch_insert_data_volume_into_layer(LayerHandle layer, Core::DataVolumeHandle data, bool update_histogram)	Seg3D::LayerFilter
dispatch_insert_mask_volume_into_layer(LayerHandle layer, Core::MaskVolumeHandle mask)	Seg3D::LayerFilter
dispatch_unlock_layer(LayerHandle layer)	Seg3D::LayerFilter
dst_layer_ (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
epsilon_function (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
final_parameters (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
final_transform (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
find_layer(const std::string &layer_id, LayerHandle &layer)	Seg3D::LayerFilter
fixed_image (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
fixed_iso (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
fixed_iso_points_set (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
fixed_point_container (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
fixed_point_set (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
fixed_points_num (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
FLOAT_CONTAINER_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
FLOAT_IMAGE_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
for(cii=fixed_iso_points_set.begin();cii!=fixed_iso_points_set.end();cii++) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo	inline
for(cii=moving_iso_points_set.begin();cii!=moving_iso_points_set.end();cii++) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo	inline
for(unsigned int i=0;i< final_parameters.size();++i) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo	inline
forward_abort_to_filter(registration, this->dst_layer_) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
forward_abort_to_filter(registration, this->dst_layer_) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
Seg3D::ITKFilter::forward_abort_to_filter(T filter_pointer, LayerHandle layer)	Seg3D::ITKFilter	inlineprotected
get_filter_name() const	Seg3D::PointSetFilterAlgo	inlinevirtual
get_itk_image_from_layer(this->mask_layer_, moving_image) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
get_itk_image_from_layer(this->src_layer_, fixed_image) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
Seg3D::ITKFilter::get_itk_image_from_layer(const LayerHandle &layer, typename Core::ITKImageDataT< T >::Handle &image, bool invert=false)	Seg3D::ITKFilter	inlineprotected
get_itk_image_from_mask_layer(const LayerHandle &layer, typename Core::ITKImageDataT< T >::Handle &image, double label=1.0)	Seg3D::ITKFilter	inlineprotected
get_key() const	Seg3D::LayerFilter
get_layer_prefix() const	Seg3D::PointSetFilterAlgo	inlinevirtual
get_notifier()	Seg3D::LayerFilter
get_sandbox()	Seg3D::LayerFilter
GetInverse(final_transform) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
gradient_tolerance (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
handle_abort()	Seg3D::ITKFilter	protectedvirtual
handle_stop()	Seg3D::ITKFilter	protectedvirtual
if(this->check_abort()) return (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
if(resampler->GetOutput()!=NULL) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo	inline
input_moving_layer (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
insert_itk_image_into_layer(const LayerHandle &layer, typename itk::Image< T, 3 > *itk_image)	Seg3D::ITKFilter	inlineprotected
insert_itk_image_pointer_into_layer(const LayerHandle &layer, typename itk::Image< T, 3 >::Pointer itk_image)	Seg3D::ITKFilter	inlineprotected
insert_itk_label_into_mask_layer(const LayerHandle &layer, typename itk::Image< T, 3 > *itk_image, T label)	Seg3D::ITKFilter	inlineprotected
insert_itk_label_pointer_into_mask_layer(const LayerHandle &layer, typename itk::Image< T, 3 >::Pointer itk_image, T label)	Seg3D::ITKFilter	inlineprotected
insert_itk_positive_labels_into_mask_layer(const LayerHandle &layer, typename itk::Image< T, 3 > *itk_image, bool invert=false)	Seg3D::ITKFilter	inlineprotected
insert_itk_positive_labels_pointer_into_mask_layer(const LayerHandle &layer, typename itk::Image< T, 3 >::Pointer itk_image, bool invert=false)	Seg3D::ITKFilter	inlineprotected
interpolator_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
iterations_ (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
ITKFilter() (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
jacobian_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
LayerAbstractFilter() (defined in Seg3D::LayerAbstractFilter)	Seg3D::LayerAbstractFilter
LayerFilter() (defined in Seg3D::LayerFilter)	Seg3D::LayerFilter
limit_number_of_itk_threads(registration) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
Seg3D::ITKFilter::limit_number_of_itk_threads(T filter_pointer)	Seg3D::ITKFilter	inlineprotected
lock_for_deletion(LayerHandle layer)	Seg3D::LayerFilter
lock_for_processing(LayerHandle layer)	Seg3D::LayerFilter
lock_for_use(LayerHandle layer)	Seg3D::LayerFilter
mask_layer_ (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
matrix_entries (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
metric (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
metric_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
moving_image (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
moving_iso (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
moving_iso_points_set (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
moving_point_container (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
moving_point_set (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
moving_points_num (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
number_of_iterations (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
observe_itk_iterations(optimizer, boost::bind( &PointSetFilterAlgo::update_iteration, this, _1, progress_unit)) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
Seg3D::ITKFilter::observe_itk_iterations(T filter_pointer, boost::function< void(itk::Object *) > iteration_fcn)	Seg3D::ITKFilter	inlineprotected
observe_itk_progress(T filter_pointer, const LayerHandle &layer, float progress_start=0.0, float progress_amount=1.0)	Seg3D::ITKFilter	inlineprotected
optimizer (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
optimizer_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
parameters_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
point_id (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
point_id (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
point_set_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
point_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
points_container_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
progress_ (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
progress_unit (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
quality_factor (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
raise_abort() override	Seg3D::LayerFilter	virtual
raise_stop()	Seg3D::LayerFilter
registration (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
registration_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
report_error(const std::string &error)	Seg3D::LayerFilter
resample_filter_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
resampler (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
ROTATION_SCALE_C (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
run()	Seg3D::LayerFilter	protectedvirtual
run_filter()=0	Seg3D::LayerFilter	protectedpure virtual
sample_ready (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
scales (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
scales(transform->GetNumberOfParameters()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
set_sandbox(SandboxID sandbox)	Seg3D::LayerFilter
SetDefaultPixelValue(0) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetEpsilonFunction(epsilon_function) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetFixedPointSet(fixed_point_set) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetGradientTolerance(gradient_tolerance) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetIdentity() (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetInitialTransformParameters(transform->GetParameters()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetInput(moving_image->get_image()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetMetric(metric) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetMovingPointSet(moving_point_set) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetNumberOfIterations(number_of_iterations) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetOptimizer(optimizer) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetOutputDirection(fixed_image->get_image() ->GetDirection()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetOutputOrigin(fixed_image->get_image() ->GetOrigin()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetOutputSpacing(fixed_image->get_image() ->GetSpacing()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetParameters(final_parameters) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetPoints(fixed_point_container) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetPoints(moving_point_container) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetScales(scales) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetSize(fixed_image->get_image() ->GetLargestPossibleRegion().GetSize()) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetTransform(transform) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetTransform(final_transform) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetUseCostFunctionGradient(false) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
SetValueTolerance(value_tolerance) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
solution (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
src_layer_ (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
Start(RunnableHandle runnable) (defined in Core::Runnable)	Core::Runnable	static
transform (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
transform_base_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
transform_state_id_ (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
transform_type typedef (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
TRANSLATION_SCALE_C (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
try (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
UCHAR_CONTAINER_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
UCHAR_IMAGE_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
UINT_CONTAINER_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
UINT_IMAGE_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
Update() (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
update_provenance_action_string(Core::ActionHandle action)	Seg3D::LayerFilter
USHORT_CONTAINER_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
USHORT_IMAGE_TYPE typedef (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter
value_tolerance (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo
while(!sample_ready) (defined in Seg3D::PointSetFilterAlgo)	Seg3D::PointSetFilterAlgo	inline
~ITKFilter() (defined in Seg3D::ITKFilter)	Seg3D::ITKFilter	virtual
~LayerAbstractFilter() (defined in Seg3D::LayerAbstractFilter)	Seg3D::LayerAbstractFilter	virtual
~LayerFilter() (defined in Seg3D::LayerFilter)	Seg3D::LayerFilter	virtual
~Runnable() (defined in Core::Runnable)	Core::Runnable	virtual