Inheritance diagram for Core::NrrdData:

Public Types
typedef boost::recursive_mutex	mutex_type

typedef boost::unique_lock< mutex_type >	lock_type

Public Member Functions
	NrrdData (Nrrd *nrrd, bool own_data=true)

	NrrdData (DataBlockHandle data_block)

	NrrdData (DataBlockHandle data_block, GridTransform transform)

Nrrd *	nrrd () const
	Return the nrrd structure.

void *	get_data () const
	Get the pointer to the data block within the nrrd.

bool	own_data () const
	Return whether the nrrd owns the data.

GridTransform	get_grid_transform () const
	Extract the transform from the nrrd.

Transform	get_transform () const
	Extract the cell-centered transform from the nrrd.

void	set_transform (GridTransform &transform)
	Set the transfrom in the nrrd data.

Histogram	get_histogram (bool trust_meta_data=false)

void	set_histogram (const Histogram &histogram)
	Insert a histogram into a nrrd's meta data.

size_t	get_nx () const
	Get the dimensions of the nrrd.

size_t	get_ny () const

size_t	get_nz () const

size_t	get_size () const
	Get the total size of the nrrd in pixels.

DataType	get_data_type () const
	Get the data type of the nrrd.

bool	get_originally_node_centered () const

Static Public Member Functions
static bool	LoadNrrd (const std::string &filename, NrrdDataHandle &nrrddata, std::string &error)
	Load a nrrd into the nrrd data structure.

static bool	SaveNrrd (const std::string &filename, NrrdDataHandle nrrddata, std::string &error, bool compress, int level)

static mutex_type &	GetMutex ()
	Get the mutex that protects the Teem library.

Constructor & Destructor Documentation

Core::NrrdData::NrrdData	(	Nrrd *	nrrd,
		bool	own_data = `true`
	)

Construct the NrrdData wrapper from a nrrd own_data tells whether the data should be destroyed when this object is deleted

Core::NrrdData::NrrdData ( DataBlockHandle data_block )

Construct a NrrdData object from an existing DataBlock of data The datablock handle will be stored internally until the object is deleted and the memory with the data is shared between the object and the nrrd object.

Member Function Documentation

Histogram Core::NrrdData::get_histogram ( bool trust_meta_data = false )

Get the histogram from the nrrd NOTE: If the data source can be trusted, the histogram is taken from the meta data, otherwise it is recomputed

bool Core::NrrdData::get_originally_node_centered ( ) const

Get whether the nrrd was originally node-centered Internally Seg3D converts the transform to be cell-centered, but we keep track of what the original centering was so that the transform can be converted back to be node-centered on export.

bool Core::NrrdData::SaveNrrd	(	const std::string &	filename,
		NrrdDataHandle	nrrddata,
		std::string &	error,
		bool	compress,
		int	level
	)

static

Save a nrrd to file from nrrd data structure If compress is false, level will be overridden and set to 0, which corresponds to zlib setting for no compression

The documentation for this class was generated from the following files:

Core/DataBlock/NrrdData.h
Core/DataBlock/NrrdData.cc

Public Types

Public Member Functions

Static Public Member Functions

Constructor & Destructor Documentation

Member Function Documentation