Seg3D
2.4
Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.
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Public Member Functions | |
void | finish () |
void | reset () |
bool | is_command_line_parameter (const std::string &key) |
bool | check_command_line_parameter (const std::string &key, std::string &value) |
std::string | get_argument (int idx) |
Get the argument (required parameter) | |
void | set_command_line_parameter (const std::string &key, const std::string &value) |
put parameters from the command line into a map | |
void | parse_command_line_parameters (int argc, char **argv, int num_arguments=0) |
parse parameters from the command line | |
void | log_start () |
Log information about the system to the log file. | |
void | log_finish () |
bool | get_user_directory (boost::filesystem::path &user_dir, bool config_path=false) |
Get the user directory on the current system. | |
bool | get_config_directory (boost::filesystem::path &config_dir) |
Get the configuration directory on the current system. | |
bool | get_user_desktop_directory (boost::filesystem::path &user_desktop_dir) |
get the path of the users desktop directory | |
bool | get_user_name (std::string &user_name) |
Get the current username. | |
bool | get_application_filepath (boost::filesystem::path &app_filepath) |
The directory from which the application was launched. | |
bool | get_application_filename (boost::filesystem::path &app_filename) |
The directory from which the application was launched plus the name of the executable. | |
long long | get_total_virtual_memory () |
Get the total amount of virtual memory available. | |
long long | get_total_physical_memory () |
Get the total amount of physical memory available. | |
long long | get_total_addressable_memory () |
Get the amount of addressable memory available. | |
long long | get_total_addressable_physical_memory () |
Get the amount of addressable memory available inside RAM. | |
long long | get_my_virtual_memory_used () |
Get the amount of virtual memory used by current process. | |
long long | get_my_physical_memory_used () |
Get the amount of physical memory used by current process. | |
int | get_process_id () |
Get the process id for the current process. | |
bool | is_osx_10_5_or_less () |
Public Member Functions inherited from Core::EventHandler | |
bool | is_eventhandler_thread () const |
Is this the event handler thread. | |
void | post_event (boost::function< void() > function) |
void | post_and_wait_event (boost::function< void() > function) |
bool | process_events () |
Process the events that are in the event handler queue. | |
bool | wait_and_process_events () |
Wait for events to come in and process the events. | |
bool | start_eventhandler () |
bool | eventhandler_started () |
Check whether the eventhandler is running. | |
virtual void | run_eventhandler () |
The main functions that processes all the incoming events. | |
void | install_eventhandler_context (EventHandlerContextHandle &context) |
Public Member Functions inherited from Core::RecursiveLockable | |
mutex_type & | get_mutex () const |
Static Public Member Functions | |
static bool | IsApplicationThread () |
Test whether the current thread is the application thread. | |
static void | PostEvent (boost::function< void() > function) |
Short cut to the event handler. | |
static void | PostAndWaitEvent (boost::function< void() > function) |
Short cut to the event handler. | |
static mutex_type & | GetMutex () |
Get the mutex of the application. | |
static void | Reset () |
Reset the application. | |
static std::string | GetVersion () |
Get the application version. | |
static int | GetMajorVersion () |
Major release version. | |
static int | GetMinorVersion () |
Minor release version. | |
static int | GetPatchVersion () |
Patch version. | |
static bool | Is64Bit () |
Is the executable a 64bit version. | |
static bool | Is32Bit () |
Is the executable a 64bit version. | |
static std::string | GetApplicationName () |
Get the name of the application. | |
static std::string | GetApplicationNameAndVersion () |
Get the name of the application and its version. | |
static std::string | GetAbout () |
Get the information that should be shown in the about screen. | |
static std::string | GetUtilName () |
Get the name of the utility. | |
static void | SetUtilName (const std::string &name) |
Set the name of the utility. | |
Public Attributes | |
boost::signals2::signal< void() > | reset_signal_ |
boost::signals2::signal< void() > | application_start_signal_ |
boost::signals2::signal< void() > | application_stop_signal_ |
This signal is triggered at the end of the program. | |
Additional Inherited Members | |
Public Types inherited from Core::RecursiveLockable | |
typedef boost::recursive_mutex | mutex_type |
typedef boost::unique_lock< mutex_type > | lock_type |
Protected Member Functions inherited from Core::EventHandler | |
virtual void | initialize_eventhandler () |
void | terminate_eventhandler () |
bool Core::Application::check_command_line_parameter | ( | const std::string & | key, |
std::string & | value | ||
) |
check to see if a particular parameter has been placed into the map if so it returns the value as a string
void Core::Application::finish | ( | ) |
Execute the remainder of the actions and terminate the application thread NOTE: This function should be called by main at the end of the program to ensure that actions like saving the last session are properly executed.
void Core::Application::reset | ( | ) |
Reset the application. It triggers the reset_signal_. NOTE: This function should only be called in the application thread.
boost::signals2::signal< void () > Core::Application::application_start_signal_ |
This signal is triggered at the start of the application, before the splash screen is shown. This signal can be used to initialize code from plugins
boost::signals2::signal< void () > Core::Application::reset_signal_ |
This signal is triggered by calling the reset function. WARNING: Do NOT trigger this signal directly. Call the reset function instead.