Seg3D Pages

Web pages for Seg3D

View the Project on GitHub SCIInstitute/Seg3D

Seg3D ( is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.


Check the Platform Specifications for system requirements.

Installers are provided for Windows and Mac OS X. Linux users need to build Seg3D from source.

User Documentation

A basic functionality manual , tool and filter reference, and tutorial are available.

Developer Documentation

Python Documentation