itk::CompactlySupportedRBFSparseKernelTransform

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Inherits from itk::SparseKernelTransform< TScalarType, 3 >, Transform< TScalarType, NDimensions, NDimensions >

Public Types

	Name
typedef CompactlySupportedRBFSparseKernelTransform	Self
typedef SparseKernelTransform< TScalarType, NDimensions >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::ScalarType	ScalarType
typedef Superclass::ParametersType	ParametersType
typedef Superclass::JacobianType	JacobianType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::InputVectorType	InputVectorType
typedef Superclass::OutputVectorType	OutputVectorType
typedef Superclass::InputCovariantVectorType	InputCovariantVectorType
typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType
typedef Superclass::PointsIterator	PointsIterator

Protected Types

	Name
typedef Superclass::GMatrixType	GMatrixType

Public Functions

	Name
	itkNewMacro(Self )
	itkTypeMacro(CompactlySupportedRBFSparseKernelTransform , SparseKernelTransform )
	itkStaticConstMacro(SpaceDimension , unsigned int , Superclass::SpaceDimension )
void	SetSigma(double sigma)
virtual void	ComputeJacobianWithRespectToParameters(const InputPointType & in, JacobianType & jacobian) const

Protected Functions

	Name
	CompactlySupportedRBFSparseKernelTransform()
virtual	~CompactlySupportedRBFSparseKernelTransform()
virtual const GMatrixType &	ComputeG(const InputVectorType & landmarkVector) const override
virtual void	ComputeDeformationContribution(const InputPointType & inputPoint, OutputPointType & result) const override

Additional inherited members

Public Types inherited from itk::SparseKernelTransform< TScalarType, 3 >

	Name
typedef DefaultStaticMeshTraits< TScalarType, NDimensions, NDimensions, TScalarType, TScalarType >	PointSetTraitsType
typedef PointSet< InputPointType, NDimensions, PointSetTraitsType >	PointSetType
typedef PointSetType::Pointer	PointSetPointer
typedef PointSetType::PointsContainer	PointsContainer
typedef PointSetType::PointsContainerConstIterator	PointsConstIterator
typedef itk::VectorContainer< unsigned long, InputVectorType >	VectorSetType
typedef VectorSetType::Pointer	VectorSetPointer
typedef Eigen::Matrix< TScalarType, NDimensions, NDimensions >	IMatrixType
typedef Eigen::Triplet< TScalarType >	TripletType
typedef Eigen::SparseMatrix< TScalarType >	LMatrixType
typedef Eigen::SparseMatrix< TScalarType >	KMatrixType
typedef Eigen::SparseMatrix< TScalarType >	PMatrixType
typedef Eigen::Matrix< TScalarType, Eigen::Dynamic, Eigen::Dynamic >	YMatrixType
typedef Eigen::Matrix< TScalarType, Eigen::Dynamic, Eigen::Dynamic >	WMatrixType
typedef Eigen::Matrix< TScalarType, Eigen::Dynamic, Eigen::Dynamic >	DMatrixType
typedef Eigen::Matrix< TScalarType, NDimensions, NDimensions >	AMatrixType
typedef Eigen::Matrix< TScalarType, NDimensions, 1 >	BMatrixType
typedef Eigen::Matrix< TScalarType, 1, NDimensions >	RowMatrixType
typedef Eigen::Matrix< TScalarType, NDimensions, 1 >	ColumnMatrixType

Public Functions inherited from itk::SparseKernelTransform< TScalarType, 3 >

	Name
	itkGetObjectMacro(SourceLandmarks , PointSetType )
virtual void	SetSourceLandmarks(PointSetType * )
	itkGetObjectMacro(TargetLandmarks , PointSetType )
virtual void	SetTargetLandmarks(PointSetType * )
	itkGetObjectMacro(Displacements , VectorSetType )
void	ComputeWMatrix(void ) const
virtual OutputPointType	TransformPoint(const InputPointType & thisPoint) const
virtual void	SetIdentity()
virtual void	SetParameters(const ParametersType & )
virtual void	SetFixedParameters(const ParametersType & )
virtual void	UpdateParameters(void ) const
virtual const ParametersType &	GetParameters(void ) const
virtual const ParametersType &	GetFixedParameters(void ) const
virtual void	SetStiffness(double stiffness)
	itkGetMacro(Stiffness , double )

Protected Functions inherited from itk::SparseKernelTransform< TScalarType, 3 >

	Name
	SparseKernelTransform()
virtual	~SparseKernelTransform()
void	PrintSelf(std::ostream & os, Indent indent) const
virtual const GMatrixType &	ComputeReflexiveG(PointsIterator ) const
void	ComputeK() const
void	ComputeL() const
void	ComputeP() const
void	ComputeY() const
void	ComputeD() const
void	ReorganizeW(void ) const

Public Attributes inherited from itk::SparseKernelTransform< TScalarType, 3 >

	Name
PointSetPointer	m_SourceLandmarks
PointSetPointer	m_TargetLandmarks

Protected Attributes inherited from itk::SparseKernelTransform< TScalarType, 3 >

	Name
double	m_Stiffness
VectorSetPointer	m_Displacements
LMatrixType	m_LMatrix
LMatrixType	m_LMatrixInverse
KMatrixType	m_KMatrix
PMatrixType	m_PMatrix
YMatrixType	m_YMatrix
WMatrixType	m_WMatrix
DMatrixType	m_DMatrix
AMatrixType	m_AMatrix
BMatrixType	m_BVector
GMatrixType	m_GMatrix
bool	m_WMatrixComputed
bool	m_LMatrixComputed
bool	m_LInverseComputed
IMatrixType	m_I

Detailed Description

template <class TScalarType ,
unsigned int NDimensions =3>
class itk::CompactlySupportedRBFSparseKernelTransform;

Public Types Documentation

typedef Self

typedef CompactlySupportedRBFSparseKernelTransform itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::Self;

Standard class typedefs.

typedef Superclass

typedef SparseKernelTransform< TScalarType, NDimensions> itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::Superclass;

typedef Pointer

typedef SmartPointer<Self> itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::Pointer;

typedef ConstPointer

typedef SmartPointer<const Self> itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::ConstPointer;

typedef ScalarType

typedef Superclass::ScalarType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::ScalarType;

Scalar type.

typedef ParametersType

typedef Superclass::ParametersType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::ParametersType;

Parameters type.

typedef JacobianType

typedef Superclass::JacobianType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::JacobianType;

Jacobian Type

typedef InputPointType

typedef Superclass::InputPointType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::InputPointType;

These (rather redundant) typedefs are needed because on SGI, typedefs are not inherited

typedef OutputPointType

typedef Superclass::OutputPointType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::OutputPointType;

typedef InputVectorType

typedef Superclass::InputVectorType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::InputVectorType;

typedef OutputVectorType

typedef Superclass::OutputVectorType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::OutputVectorType;

typedef InputCovariantVectorType

typedef Superclass::InputCovariantVectorType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::InputCovariantVectorType;

typedef OutputCovariantVectorType

typedef Superclass::OutputCovariantVectorType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::OutputCovariantVectorType;

typedef PointsIterator

typedef Superclass::PointsIterator itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::PointsIterator;

Protected Types Documentation

typedef GMatrixType

typedef Superclass::GMatrixType itk::CompactlySupportedRBFSparseKernelTransform< TScalarType, NDimensions >::GMatrixType;

These (rather redundant) typedefs are needed because on SGI, typedefs are not inherited.

Public Functions Documentation

function itkNewMacro

itkNewMacro(
    Self 
)

New macro for creation of through a Smart Pointer

function itkTypeMacro

itkTypeMacro(
    CompactlySupportedRBFSparseKernelTransform ,
    SparseKernelTransform 
)

Run-time type information (and related methods).

function itkStaticConstMacro

itkStaticConstMacro(
    SpaceDimension ,
    unsigned int ,
    Superclass::SpaceDimension 
)

Dimension of the domain space.

function SetSigma

inline void SetSigma(
    double sigma
)

function ComputeJacobianWithRespectToParameters

virtual void ComputeJacobianWithRespectToParameters(
    const InputPointType & in,
    JacobianType & jacobian
) const

Reimplements: itk::SparseKernelTransform::ComputeJacobianWithRespectToParameters

Protected Functions Documentation

function CompactlySupportedRBFSparseKernelTransform

inline CompactlySupportedRBFSparseKernelTransform()

function ~CompactlySupportedRBFSparseKernelTransform

inline virtual ~CompactlySupportedRBFSparseKernelTransform()

function ComputeG

virtual const GMatrixType & ComputeG(
    const InputVectorType & landmarkVector
) const override

Reimplements: itk::SparseKernelTransform::ComputeG

Compute G(x) This is essentially the kernel of the transform. By overriding this method, we can obtain (among others): Elastic body spline Thin plate spline Volume spline

function ComputeDeformationContribution

virtual void ComputeDeformationContribution(
    const InputPointType & inputPoint,
    OutputPointType & result
) const override

Reimplements: itk::SparseKernelTransform::ComputeDeformationContribution

Compute the contribution of the landmarks weighted by the kernel funcion to the global deformation of the space

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Updated on 2022-07-23 at 17:50:02 -0600